2024
- A family of di-glutamate mucin-degrading enzymes that bridges glycan hydrolases and peptidases Narimatsu et al., Nat Catal, 2024
- Molecular-level architecture of Chlamydomonas reinhardtii’s glycoprotein-rich cell wall Poulhazan et al., Nat Commun, 2024
- Targeting host O-linked glycan biosynthesis affects Ebola virus replication efficiency and reveals differential GalNAc-T acceptor site preferences on the Ebola virus glycoprotein Bagdonaite et al., J Virol, 2024
2023
- The SHDRA syndrome-associated gene TMEM260 encodes a protein-specific O-mannosyltransferase Larsen et al., Proc. Natl. Acad. Sci. U.S.A., 2023
2022
- Applying transcriptomics to study glycosylation at the cell type level Dworkin et al., iScience, 2022
2021
- Display of the human mucinome with defined O-glycans by gene engineered cells Nason et al., Nat Commun, 2021
2020
- Global view of human protein glycosylation pathways and functions Schjoldager et al., Nat Rev Mol Cell Biol, 2020
- An atlas of O-linked glycosylation on peptide hormones reveals diverse biological roles Madsen et al., Nat Commun, 2020
- Cell-Based Glycan Arrays—A Practical Guide to Dissect the Human Glycome Büll et al., STAR Protocols, 2020
- O‐glycan initiation directs distinct biological pathways and controls epithelial differentiation Bagdonaite et al., EMBO Reports, 2020
- Structural characterization of an unprecedented lectin-like antitumoral anti-MUC1 antibody Macías-León et al., Chem. Commun., 2020
2019
- A strategy for generating cancer-specific monoclonal antibodies to aberrantO-glycoproteins: identification of a novel dysadherin-Tn antibody Steentoft et al., Glycobiology, 2019
- An Atlas of Human Glycosylation Pathways Enables Display of the Human Glycome by Gene Engineered Cells Narimatsu et al., Molecular Cell, 2019
- Exploring Regulation of Protein O-Glycosylation in Isogenic Human HEK293 Cells by Differential O-Glycoproteomics Narimatsu et al., Molecular & Cellular Proteomics, 2019
2018
- A validated gRNA library for CRISPR/Cas9 targeting of the human glycosyltransferase genome Narimatsu et al., Glycobiology, 2018
- Fine-Tuning Limited Proteolysis: A Major Role for Regulated Site-Specific O-Glycosylation Goth et al., Trends in Biochemical Sciences, 2018
2017
- GlycoDomainViewer: a bioinformatics tool for contextual exploration of glycoproteomes Joshi et al., Glycobiology, 2017
2018
- Glycosyltransferase genes that cause monogenic congenital disorders of glycosylation are distinct from glycosyltransferase genes associated with complex diseases Joshi et al., Glycobiology, 2018
- Probing the contribution of individual polypeptide GalNAc-transferase isoforms to the O-glycoproteome by inducible expression in isogenic cell lines Hintze et al., Journal of Biological Chemistry, 2018
- SnapShot: O-Glycosylation Pathways across Kingdoms Joshi et al., Cell, 2018
- TAILS N-terminomics and proteomics reveal complex regulation of proteolytic cleavage by O-glycosylation King et al., Journal of Biological Chemistry, 2018
2017
- Characterizing the O-glycosylation landscape of human plasma, platelets, and endothelial cells King et al., Blood Advances, 2017
- Discovery of an O-mannosylation pathway selectively serving cadherins and protocadherins Larsen et al., Proc. Natl. Acad. Sci. U.S.A., 2017
- Mammalian O-mannosylation of cadherins and plexins is independent of protein O-mannosyltransferases 1 and 2 Larsen et al., Journal of Biological Chemistry, 2017
2016
- Global Mapping of O-Glycosylation of Varicella Zoster Virus, Human Cytomegalovirus, and Epstein-Barr Virus Bagdonaite et al., Journal of Biological Chemistry, 2016
- Mapping the O-Mannose Glycoproteome in Saccharomyces cerevisiae Neubert et al., Molecular & Cellular Proteomics, 2016
2015
-
Deconstruction of O‐glycosylation—Gal
NA c‐T isoforms direct distinct subsets of the O‐glycoproteome Schjoldager et al., EMBO Reports, 2015 - A Strategy for O-Glycoproteomics of Enveloped Viruses—the O-Glycoproteome of Herpes Simplex Virus Type 1 Bagdonaite et al., PLoS Pathog, 2015
2014
- Probing polypeptide GalNAc-transferase isoform substrate specificities by in vitro analysis Kong et al., Glycobiology, 2014
- A glycogene mutation map for discovery of diseases of glycosylation Hansen et al., Glycobiology, 2014
2015
- Eukaryotic Glycosylation: Online Methods for Site Prediction on Protein Sequences Joshi et al., Methods in Molecular Biology, 2015
2014
- Protein O-GalNAc Glycosylation: Most Complex and Differentially Regulated PTM Joshi et al., Glycoscience: Biology and Medicine, 2014
- The GalNAc-type O-Glycoproteome of CHO Cells Characterized by the SimpleCell Strategy Yang et al., Molecular & Cellular Proteomics, 2014
2013
- Mining the O-mannose glycoproteome reveals cadherins as major O-mannosylated glycoproteins Vester-Christensen et al., Proc. Natl. Acad. Sci. U.S.A., 2013
- Precision mapping of the human O-GalNAc glycoproteome through SimpleCell technology Steentoft et al., EMBO J, 2013
- MASCP gator: an overview of the Arabidopsis proteomic aggregation portal Mann et al., Front. Plant Sci., 2013
- Managing the green proteomes for the next decade of plant research Carroll et al., Front. Plant Sci., 2013
- Proteome coverage of the model plant Arabidopsis thaliana: Implications for shotgun proteomic studies Mann et al., Journal of Proteomics, 2013
2012
- 1001 Proteomes: a functional proteomics portal for the analysis of Arabidopsis thaliana accessions Joshi et al., Bioinformatics, 2012
2010
- MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data Joshi et al., Plant Physiol., 2010
- An Integrative Approach to the Identification of Arabidopsis and Rice Genes Involved in Xylan and Secondary Wall Development Oikawa et al., PLoS ONE, 2010
- EUROCarbDB: An open-access platform for glycoinformatics von der Lieth et al., Glycobiology, 2010
- GlycoViewer: a tool for visual summary and comparative analysis of the glycome Joshi et al., Nucleic Acids Research, 2010
2007
- Sharing of worldwide distributed carbohydrate-related digital resources: online connection of the Bacterial Carbohydrate Structure DataBase and GLYCOSCIENCES.de Toukach et al., Nucleic Acids Research, 2007
2004
- Development of a mass fingerprinting tool for automated interpretation of oligosaccharide fragmentation data Joshi et al., Proteomics, 2004
- Negative ion graphitised carbon nano‐liquid chromatography/mass spectrometry increases sensitivity for glycoprotein oligosaccharide analysis Karlsson et al., Rapid Comm Mass Spectrometry, 2004
2003
- GlycoSuiteDB: a curated relational database of glycoprotein glycan structures and their biological sources. 2003 update Cooper et al., Nucleic Acids Research, 2003
Publications
Publications from the In Silico Glycomics group, and Hiren Joshi.
Nature Reviews Molecular Cell Biology cover image
Molecular Cell feature cover image
Glycobiology feature cover image
SnapShot illustration